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CryoSPARC is not already running. If you would like to restart, use cryosparcm restart Starting cryoSPARC System master process.. CryoSPARC is not already running. database: ERROR (spawn error) |
In such case you shouldshould check logs for errors
main log in
~/.cryosparc/log/run/command_core.log
Code Block title database log less ~/.cryosparc/log/run/command_core.log
supervisor log in
~/.cryosparc/log/run/supervisord.log
Code Block title database log less ~/.cryosparc/log/run/supervisord.log
database log in
check your database log in~/.cryosparc/log/run/database.log
Code Block title database log less ~/.cryosparc/log/run/database.log
- if there is information that database is "node is not in primary or recovering state" i.e. below
Code Block title cryoSPARC log with error AssertionError: {'code': 500, 'data': None, 'message': "OtherError: node is not in primary or recovering state, full error: {'ok': 0.0, 'errmsg': 'node is not in primary or recovering state', 'code': 13436, 'codeName': 'NotMasterOrSecondary'}
then:
you have to move current cryoSPARC database
Code Block title database log mv ~/.cryosparc/cryosparc_database ~/.cryosparc/cryosparc_database-$(date+"%Y-%m-%d")
rerun configuration of cryoSPARC to rebuild database
- import projects that you want working with