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Start interactive job
Code Block language bash title Interactive job srun -p plgrid-services --nodes=1 --ntasks=1 --time=0-1 --pty bash
Load cryoSPARC environment using module (remember to use correct version of cryoSPARC)
Code Block language bash title Load cryoSPARC environment module add plgrid/apps/cryosparc/<version>
Run script that update cluster lanes
Warning title cryoSPARC master job There should be only one job which run cryoSPARC master per user. Therefore you should stop job with cryoSPARC master before this step
- Run script that update cluster lanes
Code Block language bash title Load cryoSPARC environment cryosparc_lanes_updater
Stop cryoSPARC master
Code Block language bash title run cryoSPARC master cryosparcm stop
End interactive job
Code Block language bash title end interactive job exit